- Long-term PPIs may affect B12 absorption: Reduced stomach acid limits vitamin B12 release from food.
- Metformin can lower B12 levels: It may interfere with intestinal vitamin B12 absorption.
- Monitoring helps prevent deficiency: Regular testing and B12-rich foods support healthy vitamin levels.
Proton Pump Inhibitors (PPIs) are used by millions of people worldwide to treat acid reflux or chronic heartburn, while metformin is used to treat type 2 diabetes. Most of the time, these medications work well and don’t cause trouble. But now, there’s new research showing that taking them for a long time can mess with how your body takes in vitamin B12.
This article will discuss the functions of vitamin B12 in the body, how metformin and PPIs may impact B12 absorption, who is at risk, typical symptoms, how a deficiency is identified, and useful methods for managing or preventing low B12 levels.
Read More: Beyond Weight Loss: GLP-1 Benefits for Heart Disease and Diabetes Prevention
Why Vitamin B12 Is Essential for the Body
Key Roles of Vitamin B12
Water-soluble vitamin B12 is essential for many bodily functions. It participates in:
The body requires B12 to produce healthy red blood cells: Anemia and exhaustion result from large, malfunctioning red blood cells caused by insufficient B12.
Nerve function and myelin maintenance: It keeps the myelin sheath healthy, so your nerves stay protected and work the way they should. That’s huge for your entire nervous system.
DNA synthesis: Your body relies on vitamin B12 to copy and repair DNA correctly.
Energy metabolism: If you don’t get enough, you end up feeling drained. Vitamin B12 helps turn food into real, usable energy.
How the Body Absorbs Vitamin B12
Unlike many nutrients the body absorbs directly from meals, multiple factors work together to facilitate Vitamin B12 absorption through a multi-step process.
Before being absorbed, vitamin B12 must be liberated from its protein-bound state. When food and saliva are combined in the mouth, the process begins. The liberated vitamin B12 then attaches itself to haptocorrin, a salivary protein that binds cobalamin.
The activities of hydrochloric acid and gastric protease in the stomach release more vitamin B12 from its dietary matrix, where it binds to haptocorrin. Vitamin B12 is liberated from haptocorrin in the duodenum by digestive enzymes. This liberated vitamin B12 then binds to intrinsic factor, a transport and delivery protein secreted by the parietal cells of the stomach.
Receptor-mediated endocytosis absorbs the resultant complex in the distal ileum. Since vitamin B12 is already in its free form when added to fortified foods and dietary supplements, the separation step is unnecessary.
How Proton Pump Inhibitors Can Affect B12 Levels

What PPIs Do in the Body
Proton pump inhibitors, or PPIs, lower the amount of acid your stomach makes. You need some acid, it’s what helps you digest food and keeps harmful bacteria in check. But when your stomach makes too much, that’s when trouble starts. You can end up with things like acid reflux or ulcers. However, doctors also consider long-term PPI side effects when these medications are used for extended periods.
Gastroesophageal Reflux Disease (GERD): Doctors often turn to PPIs when treating problems like GERD—the main culprit behind that burning feeling in your chest. GERD occurs when acid backs up into your esophagus, irritating or damaging its lining.
- pylori infection: PPIs also come into play if you’ve picked up an H. pylori infection. This bacteria can mess up your digestive tract, causing gastritis, ulcers, and sometimes something more serious, like stomach cancer.
Intestinal and stomach ulcers: These pop up when stomach acid damages the protective lining inside your stomach or small intestine.
Zollinger-Ellison syndrome: With this rare condition, tumors produce a hormone that triggers your stomach to make way too much acid.
Read More: Evidence: How Reversing Prediabetes Affects Heart Health
Why Reduced Stomach Acid Matters for B12
To separate vitamin B12 from dietary proteins, stomach acid is required.
When prolonged usage of PPIs results in low stomach acid:
- Meals may release less vitamin B12, which can limit the amount the body absorbs.
- Lower circulation levels and eventually a deficit may arise from a diminished pool of absorbable B12 over time.
Who May Be Most Affected
Although the risk usually develops gradually rather than instantly, the following factors may increase vulnerability:
- PPI has been used for several years.
- Increased PPI dosages.
- Restricted consumption of vitamin B12.
- Older age.
- Additional circumstances that impede absorption.
How Metformin May Contribute to B12 Deficiency

How Metformin Works
The most popular treatment for type 2 diabetes is this drug. If you have prediabetes or gestational diabetes, you may also take it. It is a member of the class of medications known as biguanides. The only biguanide on the market is metformin.
Taking metformin does not indicate that you are not controlling your diabetes. In fact, it should help you control your diabetes and may even boost your confidence.
- Lowering the quantity of glucose or sugar your liver releases into your body.
- Improving the efficiency of the insulin your body produces.
In other words, metformin reduces insulin resistance, improving the effectiveness of your own insulin.
Possible Mechanism Behind B12 Reduction
Metformin may interfere with the calcium-dependent process that allows the B12–intrinsic factor complex to enter the bloodstream, thereby reducing vitamin B12 absorption in the small intestine. Over time, this interference may reduce the amount of B12 absorbed, leading to progressively lower circulating levels.
How Common Is This Effect?
Metformin causes B12 deficiency due to its frequent reduction in vitamin B12 levels. If you have new or worsening symptoms of intense fatigue, a sore and red tongue, pins and needles, or pale or yellow skin while taking metformin, consult a doctor. These symptoms may indicate low vitamin B12 levels.
Blood tests may be necessary to determine the cause of your symptoms, which may be due to diabetes or other unrelated medical conditions. You can continue taking metformin while correcting your vitamin B12 levels. Never stop taking any medication without first talking to your doctor about it.
Read More: How to Reverse Prediabetes in 3 Months: Science-Backed Steps That Really Work
Symptoms That May Signal Low Vitamin B12
Vitamin B12 insufficiency symptoms can appear gradually and worsen with time. Despite having a low level of vitamin B12 in your body, you might not experience any symptoms. Physical, neurological, and psychological problems can result from a vitamin B12 deficiency.
Physical symptoms can include:
- Feeling very tired or weak.
- Having diarrhea, nausea, or vomiting.
- Not feeling the same level of hunger.
- Weight loss.
- Having tongue ulcers or a painful mouth.
- Having pale skin.
Neurological symptoms can include:
- Your hands and feet may feel tingly or numb.
- Vision issues.
- Being easily confused or having trouble remembering things.
- Not being able to walk or speak normally.
Among the psychological symptoms are:
- Having a bad mood.
- Irritated feelings.
- Feeling or acting differently after going through a shift.
How Doctors Check for Vitamin B12 Deficiency

Diagnosing a vitamin B12 deficiency can be challenging, as symptoms may not be present or may resemble those of other nutritional deficiencies. When a patient has a significant risk of developing B12 deficiency, medical professionals typically perform blood tests to screen for it.
The following specific tests can be used to identify vitamin B12 deficiency:
- CBC stands for complete blood count.
- Test for vitamin B12.
- Test for methylmalonic acid (MMA).
- Test for homocysteine.
Strategies to Reduce the Risk of B12 Deficiency
Maintaining a regular diet high in vitamin B12 is crucial if you are otherwise healthy.
Vitamin B12-rich foods include:
- Lean red meat and chicken.
- Seafood, like clams and oysters; fish, like salmon and catfish.
- Cheese, yogurt, milk, and vegan milk alternatives with added nutrients.
- Grains with added nutrients.
- Eggs
When to Discuss B12 Levels With Your Healthcare Provider
Consider discussing vitamin B12 testing with your physician if you:
- Have been on metformin or long-term PPI medication, which are medications that cause low vitamin B12.
- Feel fatigued for no apparent reason.
- Note any neurological symptoms, numbness, or balance problems.
- Eat a diet low in animal products, such as a vegetarian or vegan diet.
- Possess additional risk factors, such as GI disorders or advanced age.
Read More: Diabetes Diet: How Plant-Based Eating Can Transform Your Health
Conclusion
People living with chronic issues like acid reflux or type 2 diabetes often rely on long-term medications, like metformin or proton pump inhibitors. Sticking with these treatments helps control symptoms and keep things in check.
Long-term use of these medications, however, may progressively impair the body’s capacity to absorb vitamin B12, raising some possibility of metformin B12 deficiency or decreased levels associated with acid-suppressive therapy.
If you’ve been taking these meds for a long time, staying informed really matters. Regular checkups, the right tests, and honest conversations with your doctor about what you’re feeling help catch problems early, before they sneak up on you.
References
- National Institutes of Health, Office of Dietary Supplements. Vitamin B12.:
- Harvard T.H. Chan School of Public Health. Vitamin B12.
- Cleveland Clinic. (2025, September 30). Vitamin B12 deficiency: Symptoms, causes & treatment.
- National Heart, Lung, and Blood Institute. (2022, March 24). Vitamin B12–deficiency anemia.
- Mayo Clinic. (Aug. 13, 2025). Vitamin B-12.
- Drugwatch. (2025, December 11). Proton pump inhibitors (PPIs): Uses, side effects and risks
- Diabetes UK. (2024, June 18). Metformin: Uses, how it works and side effects.
In this Article





















